PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA1098G00001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family CAMTA
Protein Properties Length: 970aa    MW: 109227 Da    PI: 5.8677
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA1098G00001genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1174.11.9e-54131292117
          CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 
                   ++e ++rwlk+ e++ iL+n+e+++l ++++++p+sgsl+L+n++++++frkDG++w++kkdg+++ E+he+LKvg+ve+l+cyYah+e+nptfqrr
  AA1098G00001  13 YQEaHNRWLKPPEVYFILQNHERYQLNHKTPQNPTSGSLLLFNKRVLKFFRKDGHQWRRKKDGRAIAEAHERLKVGTVEALNCYYAHGEHNPTFQRR 109
                   566699******************************************************************************************* PP

          CG-1  98 cywlLeeelekivlvhylev 117
                   +yw+L+ ++e+ivlvhy++v
  AA1098G00001 110 IYWMLDPAYEHIVLVHYRDV 129
                   ******************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143776.6379135IPR005559CG-1 DNA-binding domain
SMARTSM010762.8E-7512130IPR005559CG-1 DNA-binding domain
PfamPF038591.1E-4615129IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.105.7E-9401492IPR013783Immunoglobulin-like fold
SuperFamilySSF812961.71E-17407491IPR014756Immunoglobulin E-set
CDDcd001021.29E-4407492No hitNo description
PfamPF018336.0E-8408490IPR002909IPT domain
Gene3DG3DSA:1.25.40.204.6E-16602698IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.33E-16603699IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.733604696IPR020683Ankyrin repeat-containing domain
CDDcd002042.09E-15609696No hitNo description
PfamPF127961.6E-7610697IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.526637669IPR002110Ankyrin repeat
SMARTSM002480.018637666IPR002110Ankyrin repeat
SMARTSM002481800676705IPR002110Ankyrin repeat
SMARTSM0001559750772IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.114751779IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525404.25E-9751859IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.39807829IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.334808837IPR000048IQ motif, EF-hand binding site
PfamPF006120.0038809828IPR000048IQ motif, EF-hand binding site
SMARTSM000152.3E-4830852IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.993831855IPR000048IQ motif, EF-hand binding site
PfamPF006121.2E-5833852IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 970 aa     Download sequence    Send to blast
MQSVPEFDIN TLYQEAHNRW LKPPEVYFIL QNHERYQLNH KTPQNPTSGS LLLFNKRVLK  60
FFRKDGHQWR RKKDGRAIAE AHERLKVGTV EALNCYYAHG EHNPTFQRRI YWMLDPAYEH  120
IVLVHYRDVS EGKEGKLSSG KALQFSPNAS ILFSSPSSID TQNTNYNLYT SDVIDRHQLS  180
SSSPATAETN SEVVYKTTGV ETPGDSTTSS SEFEVRKALK RLEEQLSIGD DTVATLDELY  240
IQEESLDNLQ VLECSKEINH FNQPVMTVHH RSENNKLERC YGGYVGTQYH SNNLMLEKND  300
SGGKGVRGEQ ESGSWKDVLE ACEAPRVLNF ECGSTANSSK GLQQNSNWSY SSQIDQSTLL  360
LPQDLASFEV PACYSALEDH KNNGEYCRMM DEEDNIDLPL EQTKKFTILD LAPEWGYSDE  420
TTKVIIVGSF LCDPRQSTWS CMFGDTEVPF EIIKEGVLRC EAPPHRPGKV TLSITSGDRV  480
SCSEVITFEY RDKAMTCFPR SILPQTCDIS TSPDELLLLV KFVQSLLVDP LSDSKNNTKQ  540
DTDKLLKKLK ADDDQWIEAI FDAEAASSTT VNWLLQELLK DKLDVWLSSR SKDKDQVFCS  600
LSKQEQGIIH MAAGLGFEWA LYPILDHGVS VDFRDITGRS ALHWAARFGR EKMVAALIAC  660
GASAGAVTDP TSQDSDGKTA ASIAASNGHK GLAGYLSEVA LTNHLSSLTL EETKISIDSA  720
QVQAEITVSS MSEPSLPCNE DEISLAAVRN AAQAAARIQA AFRAHSFRKR KQREAAMDSC  780
FKEYGIYCRD IEGMTAISKL VSRNSRNYHS AALSIQKKYR GYKDRKDFLS LREKVVKIQA  840
HVRGYQVRKH YKVICWAVGI LDKVVLRWRR KGAGLRGFRQ DVEATEDSED DDILKVFRKK  900
KVDGAVNEAF SRVLSMANSP EARQQYHRVL KRYCQTKAEL GKTETLGEEE DEDGLFDIAD  960
MENDDLFSLP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006301894.10.0hypothetical protein CARUB_v10022369mg
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A087HG810.0A0A087HG81_ARAAL; Uncharacterized protein
STRINGfgenesh1_pm.C_scaffold_20007780.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM64762642
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains